1.
Gabriel E. Hoffman, Panos Roussos. Fast, flexible analysis of differences in cellular composition with crumblr. Nature Communications. 2026;17(1):9598. doi:10.1038/s41467-026-75681-7
Statistical methods
1.
Gabriel E. Hoffman, Donghoon Lee, Jaroslav Bendl, et al. Efficient differential expression analysis of large-scale single-cell transcriptomics data using Dreamlet. Nature Communications. 2026;17(1):9597. doi:10.1038/s41467-026-75680-8
1.
Gina Bouchard, Weiruo Zhang, Ilayda Ilerten, et al. A quantitative spatial cell-cell colocalizations framework enabling comparisons between in vitro assembloids and pathological specimens. Nature Communications. 2025;16(1):1392. doi:10.1038/s41467-024-55129-6