TY - JOUR KW - Alzheimer's disease KW - Experimental models of disease KW - induced pluripotent stem cells KW - Neurodegeneration KW - Neuroimmunology AU - Julien Klimmt AU - Carolina Cardoso Gonçalves AU - Jessica Valentina Montgomery AU - Stephan A. Müller AU - Merle Bublitz AU - Severin Filser AU - Lars Paeger AU - Brigitte Nuscher AU - Angelika Dannert AU - Sigrun Roeber AU - Veronica Pravata AU - Martina Schifferer AU - Joshua J. Shrouder AU - Nathalie Schulz AU - Judit González-Gallego AU - Silvia Cappello AU - Thomas Misgeld AU - Nikolaus Plesnila AU - Eduardo Beltrán AU - Jochen Herms AU - Elena De Domenico AU - Marc D. Beyer AU - Joachim L. Schultze AU - Christian Haass AU - Stefan F. Lichtenthaler AU - Caterina Carraro AU - Dominik Paquet AB - Stem-cell-based in vitro models offer promising potential to elucidate human brain cell functions and interactions, but limitations in reproducibility, maturation and cell-type diversity persist. Especially, prolonged incorporation of mature microglia and studies of neuroinflammation have proven challenging. Here, we developed a human induced pluripotent stem cell-based three-dimensional cortical brain tissue model (3BTM) containing neurons, astrocytes and microglia with high reproducibility, maturity and viability. 3BTMs show morphological, functional and proteomic maturation of all cell types, leading to high similarity to their in vivo counterparts. Incorporated microglia survive for over 6 months and display mature morphology, functions and gene expression. Importantly, when engineered to model Alzheimer’s disease pathology, 3BTMs recapitulate key disease hallmarks, including amyloid deposition, increased phospho-tau levels and neuroinflammation, with microglia shifting their transcriptional landscape to disease-relevant signatures. Treatment of Alzheimer’s disease 3BTMs with anti-Aβ immunotherapy cleared deposits and largely reversed disease signatures in glia. Together, our microglia-containing model provides a platform for studying physiological and pathological states of human brain tissue. BT - Nature Neuroscience DA - 2026-08-04 DO - 10.1038/s41593-026-02367-0 LA - en N2 - Stem-cell-based in vitro models offer promising potential to elucidate human brain cell functions and interactions, but limitations in reproducibility, maturation and cell-type diversity persist. Especially, prolonged incorporation of mature microglia and studies of neuroinflammation have proven challenging. Here, we developed a human induced pluripotent stem cell-based three-dimensional cortical brain tissue model (3BTM) containing neurons, astrocytes and microglia with high reproducibility, maturity and viability. 3BTMs show morphological, functional and proteomic maturation of all cell types, leading to high similarity to their in vivo counterparts. Incorporated microglia survive for over 6 months and display mature morphology, functions and gene expression. Importantly, when engineered to model Alzheimer’s disease pathology, 3BTMs recapitulate key disease hallmarks, including amyloid deposition, increased phospho-tau levels and neuroinflammation, with microglia shifting their transcriptional landscape to disease-relevant signatures. Treatment of Alzheimer’s disease 3BTMs with anti-Aβ immunotherapy cleared deposits and largely reversed disease signatures in glia. Together, our microglia-containing model provides a platform for studying physiological and pathological states of human brain tissue. PY - 2026 SP - 1 EP - 17 T2 - Nature Neuroscience TI - A reproducible three-dimensional model of human brain tissue to investigate physiological and disease-associated microglia phenotypes UR - https://www.nature.com/articles/s41593-026-02367-0 Y2 - 2026-08-06 SN - 1546-1726 ER -