@article{6351, keywords = {endothelial system, multi-region brain organoid, neurodevelopmental processes, organoid engineering}, author = {Anannya Kshirsagar and Hayk Mnatsakanyan and Sai Kulkarni and John Guo and Kai Cheng and Luke Daniel Ofria and Oce Bohra and Ram Sagar and Vasiliki Mahairaki and Christian E Badr and Annie Kathuria}, title = {Multi-Region Brain Organoids Integrating Cerebral, Mid-Hindbrain, and Endothelial Systems}, abstract = {Brain organoid technology has revolutionized the ability to model human neurodevelopment in vitro. However, current techniques remain limited by their reliance on simplified endothelial cell populations. Multi-Region Brain Organoids (MRBOs) are engineered that integrate cerebral, mid/hindbrain, and complex endothelial organoids into one structure. Unlike earlier approaches based on isolated Human Umbilical Vein Endothelial Cells, the endothelial organoids contain diverse vascular cell types, including progenitors, mature endothelial cells, pericytes, proliferating angiogenic cells, and stromal cells. The strategy employs sequential modulation of key developmental pathways to generate individual organoids, followed by optimized fusion conditions that maintain regional identities while supporting cellular integration. Single-nucleus RNA sequencing reveals that MRBOs develop discrete neural populations specific to each brain region alongside specialized endothelial populations that establish paracrine signaling networks. Integration analysis with human fetal brain data shows that MRBOs contribute to 80% of cellular clusters found in human fetal brain tissue (Carnegie stages 12–16). CellChat analysis identifies 13 previously uncharacterized endothelial-neural signaling interactions. Endothelial-derived factors are uncovered that support intermediate progenitor populations during hindbrain development, but not cerebral development, revealing a role for endothelial populations in regional brain patterning. This platform enables matching of multiple developmental regions while incorporating endothelial components, providing opportunities for studying neurodevelopmental disorders with disrupted neural-endothelial interactions.}, year = {2025}, journal = {Advanced Science}, volume = {12}, pages = {e03768}, month = {2025}, issn = {2198-3844}, url = {https://onlinelibrary.wiley.com/doi/abs/10.1002/advs.202503768}, doi = {10.1002/advs.202503768}, language = {en}, }